|
Classification
|
From public databases
|
Extracted from HTGS/PLANT
|
Total
|
|
Number
|
Total length (kb)
|
Average length (bp)
|
Number
|
Total length (kb)
|
Average length (bp)
|
Number
|
Total length (kb)
|
Average length (bp)
|
|
Transposable
elements (total)
|
197
|
59.3
|
|
6
|
2.1
|
|
203
|
61.4
|
|
|
Retrotransposons
|
196
|
57.2
|
291.7
|
6
|
2.1
|
357.0
|
202
|
59.3
|
293.6
|
|
Transposons
|
1
|
2.1
|
2112.0
|
0
|
0
|
N/A
|
1
|
2.1
|
2112.0
|
|
MITEs
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
|
|
|
|
|
|
|
|
|
|
|
Centromere-related
(total)
|
0
|
0
|
|
0
|
0
|
|
0
|
0
|
|
|
Centromere-specific
retrotransposons
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Centromeric
satellite repeats
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Unclassified
centromere sequences
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
|
|
|
|
|
|
|
|
|
|
|
Telomere-related
(total)
|
0
|
0
|
|
0
|
0
|
|
0
|
0
|
|
|
Telomere sequences
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Telomere-associated
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
|
|
|
|
|
|
|
|
|
|
|
rDNAs (total)
|
18
|
17.9
|
|
3
|
4.6
|
|
21
|
22.4
|
|
|
45S rDNAs
|
14
|
16.3
|
1163.8
|
3
|
4.6
|
1520.0
|
17
|
20.9
|
1226.6
|
|
5S rDNAs
|
4
|
1.6
|
398.8
|
0
|
0
|
N/A
|
4
|
1.6
|
398.8
|
|
|
|
|
|
|
|
|
|
|
|
|
Unclassified
(total)
|
14
|
3.3
|
|
11
|
2.5
|
|
25
|
5.8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Total
|
229
|
80.5
|
|
20
|
9.2
|
|
249
|
89.7
|
|