|
Classification
|
From public databases
|
Extracted from HTGS/PLANT
|
Total
|
|
Number
|
Total length (kb)
|
Average length (bp)
|
Number
|
Total length (kb)
|
Average length (bp)
|
Number
|
Total length (kb)
|
Average length (bp)
|
|
Transposable
elements (total)
|
23
|
95.1
|
|
1
|
0.4
|
|
24
|
95.5
|
|
|
Retrotransposons
|
17
|
89.1
|
5241.1
|
0
|
0
|
N/A
|
17
|
89.1
|
5241.1
|
|
Transposons
|
6
|
6.0
|
1001.0
|
1
|
0.4
|
383.0
|
7
|
6.4
|
912.7
|
|
MITEs
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
|
|
|
|
|
|
|
|
|
|
|
Centromere-related
(total)
|
0
|
0
|
|
0
|
0
|
|
0
|
0
|
|
|
Centromere-specific
retrotransposons
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Centromeric
satellite repeats
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Unclassified
centromere sequences
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
|
|
|
|
|
|
|
|
|
|
|
Telomere-related
(total)
|
12
|
8.7
|
|
0
|
0
|
|
12
|
8.7
|
|
|
Telomere sequences
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Telomere-associated
|
12
|
8.7
|
722.9
|
0
|
0
|
N/A
|
12
|
8.7
|
722.9
|
|
|
|
|
|
|
|
|
|
|
|
|
rDNAs (total)
|
60
|
50.4
|
|
13
|
8.6
|
|
73
|
58.9
|
|
|
45S rDNAs
|
57
|
49.1
|
861.9
|
13
|
8.6
|
659.5
|
70
|
57.7
|
824.3
|
|
5S rDNAs
|
3
|
1.2
|
409.3
|
0
|
0
|
N/A
|
3
|
1.2
|
409.3
|
|
|
|
|
|
|
|
|
|
|
|
|
Unclassified
(total)
|
21
|
2.1
|
|
0
|
0
|
|
21
|
2.1
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Total
|
116
|
156.2
|
|
14
|
9
|
|
130
|
165.2
|
|