|
Classification
|
From public databases
|
Extracted from HTGS/PLANT
|
Total
|
|
Number
|
Total length (kb)
|
Average length (bp)
|
Number
|
Total length (kb)
|
Average length (bp)
|
Number
|
Total length (kb)
|
Average length (bp)
|
|
Transposable
elements (total)
|
40
|
53.7
|
|
40
|
13.9
|
|
80
|
67.6
|
|
|
Retrotransposons
|
2
|
32.4
|
16175.0
|
7
|
3.5
|
499.7
|
9
|
35.8
|
3983.1
|
|
Transposons
|
6
|
12.0
|
2007.7
|
6
|
5.8
|
969.8
|
12
|
17.9
|
1488.8
|
|
MITEs
|
32
|
9.3
|
289.4
|
27
|
4.6
|
169.6
|
59
|
13.8
|
234.6
|
|
|
|
|
|
|
|
|
|
|
|
|
Centromere-related
(total)
|
0
|
0
|
|
0
|
0
|
|
0
|
0
|
|
|
Centromere-specific
retrotransposons
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Centromeric
satellite repeats
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Unclassified
centromere sequences
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
|
|
|
|
|
|
|
|
|
|
|
Telomere-related
(total)
|
0
|
0
|
|
0
|
0
|
|
0
|
0
|
|
|
Telomere sequences
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Telomere-associated
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
|
|
|
|
|
|
|
|
|
|
|
rDNAs (total)
|
88
|
44.7
|
|
284
|
109.8
|
|
372
|
154.6
|
|
|
45S rDNAs
|
87
|
44.6
|
512.8
|
276
|
108.9
|
394.5
|
363
|
153.5
|
422.8
|
|
5S rDNAs
|
1
|
0.1
|
119.0
|
8
|
0.9
|
118.8
|
9
|
1.1
|
118.8
|
|
|
|
|
|
|
|
|
|
|
|
|
Unclassified
(total)
|
0
|
0
|
|
0
|
0
|
|
0
|
0
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Total
|
128
|
98.4
|
|
324
|
123.7
|
|
452
|
222.1
|
|