Composition of Solanaceae Repeat Database



 
Classification
Total
Solanum
Number
Total length (kb)
Average length (bp)
Number
Total length (kb)
Average length (bp)
Transposable elements (total)
188
109.4
 
188
109.4
 
Retrotransposons
174
93.7
538.5
174
93.7
538.7
Transposons
14
15.7
1121.4
14
15.7
1122.6
MITEs
0
0
N/A
0
0
N/A
 
 
 
 
 
 
 
Centromere-related (total)
0
0
 
0
0
 
Centromere-specific retrotransposons
0
0
N/A
0
0
N/A
Centromeric satellite repeats
0
0
N/A
0
0
N/A
Unclassified centromere sequences
0
0
N/A
0
0
N/A
 
 
 
 
 
 
 
Telomere-related (total)
2
3.6
 
2
3.6
 
Telomere sequences
1
2.8
2800.0
1
2.8
2793.0
Telomere-associated
1
0.8
800.0
1
0.8
766.0
 
 
 
 
 
 
 
rDNAs (total)
166
81.7
 
166
81.7
 
45S rDNAs
69
50
724.6
69
50.0
724.7
5S rDNAs
97
31.7
326.8
97
31.7
326.7
 
 
 
 
 
 
 
Unclassified (total)
15
21.2
 
15
21.2
 
 
 
 
 
 
 
 
Total
371
215.9
 
371
215.9