|
Classification
|
From public databases
|
Extracted from HTGS/PLANT
|
Total
|
|
Number
|
Total length (kb)
|
Average length (bp)
|
Number
|
Total length (kb)
|
Average length (bp)
|
Number
|
Total length (kb)
|
Average length (bp)
|
|
Transposable
elements (total)
|
400
|
1262.9
|
|
49
|
34.2
|
|
449
|
1297.1
|
|
|
Retrotransposons
|
331
|
1102.5
|
3331.0
|
49
|
34.2
|
697.1
|
380
|
1136.7
|
2991.3
|
|
Transposons
|
48
|
156.6
|
3262.4
|
0
|
0
|
N/A
|
48
|
156.6
|
3262.4
|
|
MITEs
|
21
|
3.8
|
180.6
|
0
|
0
|
N/A
|
21
|
3.8
|
180.6
|
|
|
|
|
|
|
|
|
|
|
|
|
Centromere-related
(total)
|
9
|
2.4
|
|
0
|
0
|
|
9
|
2.4
|
|
|
Centromere-specific
retrotransposons
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Centromeric
satellite repeats
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
0
|
0
|
N/A
|
|
Unclassified
centromere sequences
|
9
|
2.4
|
267.1
|
0
|
0
|
N/A
|
9
|
2.4
|
267.1
|
|
|
|
|
|
|
|
|
|
|
|
|
Telomere-related
(total)
|
25
|
9.4
|
|
3
|
0.8
|
|
28
|
10.2
|
|
|
Telomere sequences
|
6
|
2.5
|
420.8
|
1
|
0.5
|
471.0
|
7
|
3.0
|
428.0
|
|
Telomere-associated
|
19
|
6.8
|
360.1
|
2
|
0.4
|
178.0
|
21
|
7.2
|
342.8
|
|
|
|
|
|
|
|
|
|
|
|
|
rDNAs (total)
|
484
|
205.3
|
|
55
|
14.9
|
|
539
|
220.3
|
|
|
45S rDNAs
|
81
|
53.9
|
665.7
|
37
|
8.7
|
234.3
|
118
|
62.6
|
530.4
|
|
5S rDNAs
|
403
|
151.4
|
375.7
|
18
|
6.2
|
347.0
|
421
|
157.7
|
374.5
|
|
|
|
|
|
|
|
|
|
|
|
|
Unclassified
(total)
|
32
|
46.5
|
|
16
|
7.9
|
|
48
|
54.4
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Total
|
950
|
1526.4
|
|
123
|
57.9
|
|
1073
|
1584.4
|
|